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Cell Counting and Image Cytometry

Surface Marker and Intracellular Protein Detection

Section
Cellometer Applications
Celigo Applications
Cell Counting Method Selection
Cell Counting and Image Cytometry FAQs
Cell-based Assays for Bioprocessing
Cell-based Assays for Gene Therapy Development
Cellometer Applications
Modern Virology Assays
Sub Section
Fluorescent Assays
Automated Analysis of Primary Cells
Brightfield Cell Analysis
Cell Analysis for Breweries and Biofuels
Cell Concentration and Viability for Blood-based Samples
Cell Counting with a Hemocytometer
Cell Viability for Clean and Messy Samples
Fluorescent Assays
Immuno-oncology Research Using Cellometer Instruments
Miscellaneous Cell Types
Topic
Surface Marker and Intracellular Protein Detection
Apoptosis
Autophagy Detection
Cell Cycle Analysis
Expression Analysis
Surface Marker and Intracellular Protein Detection

Introduction to surface and intracellular proteins markers

Surface and intracellular proteins are markers that are important for identifying specific type of cells and characterizing cell populations. Traditionally, these assays are performed on flow cytometers. More recently,  image-based cytometry method has been utilized for many standard surface and intracellular protein detection assays to provide a simpler and more rapid method for cell population analysis. The Cellometer Vision CBA* image cytometer performs surface marker and intracellular protein fluorescence analysis to characterize cell populations. Below are examples of assays that have been performed using the Cellometer image cytometry method.

*This section refers to the Cellometer Vision CBA image cytometer which has been superseded by the Cellometer Spectrum system.

Human Activated T Cell – CD44-APC

Human T cells were stained with APC conjugated anti-CD44 and imaged on the Cellometer Vision CBA. The counted brightfield image shows T cells automatically identified by the Cellometer software and outlined in green color. The fluorescent APC image shows red surface marker staining of positively stained T cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that more than 95% of the cells were positive for CD44.
 

human activated T cell CD44 APC
Bright Field Counted Image

Brightfield counted image

Fluorescence Image

Fluorescence image

Human Activated T Cell – CD44-PE

Similar to the experiment above, Human T cells were stained with phycoerythrin (PE) conjugated anti-CD44 and imaged on the Cellometer Vision CBA. The counted brightfield image shows T cells automatically identified by the Cellometer software and outlined in green color. The fluorescent PE image shows orange surface marker staining of positively stained T cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that more than 95% of the cells were positive for CD44.

Human Activated T Cell – CD44-PE
Human Activated T Cell – CD44-PE BF

Brightfield counted image

Human Activated T Cell – CD44-PE FI

Fluorescence iImage

Macrophage in mouse bone marrow – CD11b-PE

Primary bone marrow sample was stained with PE conjugated anti-CD11b, a cell surface receptor found on the surface of several cell types including mononuclear phagocytes a.k.a macrophages. Twenty microliters of the stained sample were imaged on the Cellometer Vision CBA system. The green circles shown in the brightfield image represent automatically counted and outlined mononuclear cells. The fluorescent image shows bright staining profile of cells that are positive for CD11b. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that about 84% of the cells are positive for CD11b.

Macrophage in Mouse Bone Marrow – CD11b-PE
Macrophage in Mouse Bone Marrow – CD11b-PE BF

Brightfield counted image

Macrophage in Mouse Bone Marrow – CD11b-PE FI

Fluorescence image

Human jurkat cells – CD3-PE

Cultured Jurkat cells were stained with PE conjugated anti-CD3 surface marker and imaged on the Cellometer Vision CBA. The counted brightfield image shows Jurkat cells that were automatically identified by the Cellometer software and outlined in green color. The fluorescent PE image shows orange surface marker staining of CD3 positive Jurkat cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that more than 80% of the cells were positive for CD3.

Human Jurkat Cells – CD3-PE
Human Jurkat Cells – CD3-PE BF

Brightfield counted image

Human Jurkat Cells – CD3-PE FI

Fluorescence image

Human PBMC – CD3-FITC

Primary peripheral blood mononuclear cell (PBMC) sample was stained with FITC conjugated anti-CD3 surface marker and imaged on the Cellometer Vision CBA. The counted brightfield image shows cells that were automatically identified by the Cellometer software and outlined in green color. The fluorescent FITC image shows green surface marker staining of CD3 positive mononuclear cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that nearly 90% of the cells were positive for CD3.

Human PBMC – CD3-FITC
Human PBMC – CD3-FITC BF

Brightfield counted image

Human PBMC – CD3-FITC FI

Fluorescence image

Human PBMCs – CD3-PECy5

Similar to the CD3-FITC experiment above, a primary peripheral blood mononuclear cell (PBMC) sample was stained with anti-CD3 PE-Cy5 conjugated tandem dye and imaged on the Cellometer Vision CBA. Note that this tandem dye is a combination of phycoerythrin (PE) and cyanine (Cy5), has a broad emission spectra and was imaged using the APC filter module. The counted brightfield image shows cells that were automatically identified by the Cellometer software and outlined in green color. The fluorescent image shows a reddish surface marker staining of positively stained mononuclear cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that about 65% of the cells were positive for CD3.

Human PBMCs – CD3-PECy5
Human PBMCs – CD3-PECy5 BF

Brightfield counted image

Human PBMCs – CD3-PECy5 FI

Fluorescence image

Human PBMCs – CD19-PECy5

A primary peripheral blood mononuclear cell (PBMC) sample was stained with anti-CD19 PE-Cy5 conjugated tandem dye and imaged on the Cellometer Vision CBA. Note that this tandem dye is a combination of phycoerythrin (PE) and cyanine (Cy5), has a broad emission spectrum and was imaged using the APC filter module. The counted brightfield image shows cells that were automatically identified by the Cellometer software and outlined in green color. The fluorescent image shows a reddish surface marker staining of positively stained B-cells. The mean fluorescent intensity values for each cell were exported to flow cytometry software FCS Express™ and plotted as a histogram. The gated data shows that about 10% of the cells were positive for CD19 B-cells.

Human PBMCs – CD19-PECy5
Human PBMCs – CD19-PECy5 BF

Brightfield counted image

Human PBMCs – CD19-PECy5 FI

Fluorescence image

Mouse cells – Mouse IgG-FITC and RFP

Mouse Cells – Mouse IgG-FITC and RFP
Mouse IgG-FITC BF

Brightfield counted image

Mouse IgG-FITC FI-1

Fluorescence image

Mouse IgG-FITC FI-2

Fluorescence image

CD44 – PE

CD44 – PE data
CD44 – PE BF

Brightfield counted image

CD44 – FL

Fluorescence image

Human Lymphocytes – CD4-PE

Human lymphocytes – CD4-PE

Mouse Thymocytes – CD8-PE and CD4-APC

Mouse thymocytes – CD8-PE and CD4-APC

Mouse Splenocytes – CD8-PE and CD4-APC

Mouse splenocytes – CD8-PE and CD4-APC

MHC Dextramer – CD8-FITC and Dextramer-PE

MHC Dextramer – CD8-FITC 1
MHC Dextramer – CD8-FITC 2
MHC Dextramer Dextramer-PE

Human T cells and cytokines – CD8-PE and INFg-FITC

Human T Cells and Cytokines – CD8-PE and INFg-FITC

Intracellular proteins for protein pathway research

Various complex proteins exist in cells that are generated or removed by cellular functions. These proteins can be used as an indicator to measure certain protein pathways or functions of the cells to determine if they are operating normally or abnormally. These intracellular proteins can be fluorescently labeled and measured by the Cellometer Vision CBA image cytometer to determine the cell population associated with these proteins.

Heat shock protein in MNNG cancer cells – HSP90-PE and GFP

Heat Shock Protein in MNNG Cancer Cells – HSP90-PE and GFP
Heat Shock Protein in MNNG Cancer Cells BF

Brightfield counted image

Heat Shock Protein in MNNG Cancer Cells FL-1

Fluorescence image

Heat Shock Protein in MNNG Cancer Cells FL-2

Fluorescence image

Heat shock protein in MNNG cancer cells – Grp78-Alexa fluor 594 and GFP

Heat Shock Protein in MNNG Cancer Cells – Grp78-Alexa Fluor 594 and GFP
Heat Shock Protein in MNNG Cancer Cells BF-2

Brightfield counted image

Heat Shock Protein in MNNG Cancer Cells FL-1-2

Fluorescence image

Heat Shock Protein in MNNG Cancer Cells FL-2-2

Fluorescence image

Stem cell analysis for regenerative medicine

Stem cell markers are often used to determine the stem cell population in blood, cord blood, bone marrow, and adipose tissue. These cells are important for research in regenerative medicine, and the ability to quickly characterize a stem cell population in a cell sample can greatly improve research efficiency. The Cellometer Vision CBA image cytometer can be utilized to measure cell population of some of the common stem cell markers.

Mouse iPS cells – SSEA-1-PE

Mouse iPS Cells – SSEA-1-PE
Mouse iPS Cells – SSEA-1-PE BF

Brightfield counted image

Mouse iPS Cells – SSEA-1-PE FL

Fluorescence image

Human iPS cells – SSEA-4-PE

Human iPS Cells – SSEA-4-PE
Human iPS Cells – SSEA-4-PE BF

Brightfield counted image

Human iPS Cells – SSEA-4-PE FL

Fluorescence image

Human iPS cells – TRA-181-PE

Human iPS Cells – TRA-181-PE
Human iPS Cells – TRA-181-PE BF

Brightfield counted image

Human iPS Cells – TRA-181-PE FL

Fluorescence image

CACO2 cancer stem cells – CD133-FITC

CACO2 cancer stem cells – CD133-FITC
CACO2 cancer stem cells – CD133-FITC BF

Brightfield counted image

CACO2 cancer stem cells – CD133-FITC FL

Fluorescence image


For research use only. Not for use in diagnostic procedures.